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Accession IconSRP047246

Expression profiling pooled Drosophila melanogaster heterozygous for deletions on Chromosome 2L

Organism Icon Drosophila melanogaster
Sample Icon 343 Downloadable Samples
Technology Badge IconIllumina HiSeq 2000

Submitter Supplied Information

Description
We performed mRNA transcriptional profiling on 99 hemizygotic lines (Df/+) from the DrosDel project covering 68% of chromosome 2L, in order to understand how changes in gene copy number affect overall transcriptome. Overall design: We performed RNA-Seq analysis on 396 pools of 15-25 adult flies each. Samples include males or females from 99 different genotypes in duplicate. Differential gene expression was analyzed separately for each sex, by comparing each genotype with the remaining 98.
PubMed ID
Total Samples
396
Submitter’s Institution
No associated institution

Samples

Show of 396 Total Samples
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Accession Code
Title
Sex
Specimen part
Subject
Processing Information
Additional Metadata
Df(2L)ED3/+_female_rep2
female
whole animal
whole animal
NA
Df(2L)ED3/+_male_rep2
male
whole animal
whole animal
NA
Df(2L)ED773/+_female_rep1
female
whole animal
whole animal
NA
Df(2L)ED777/+_female_rep1
female
whole animal
whole animal
NA
Df(2L)ED777/+_female_rep2
female
whole animal
whole animal
NA
Df(2L)ED4651/+_female_rep2
female
whole animal
whole animal
NA
Df(2L)ED508/+_female_rep2
female
whole animal
whole animal
NA
Df(2L)ED1109/+_female_rep1
female
whole animal
whole animal
NA
Df(2L)ED1109/+_male_rep1
male
whole animal
whole animal
NA
Df(2L)ED3/+_female_rep1
female
whole animal
whole animal
NA
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