refine.bio
  • Search
      • Normalized Compendia
      • RNA-seq Sample Compendia
  • Docs
  • About
  • My Dataset
github link
Showing
of 117 results
Sort by

Filters

Technology

Platform

accession-icon GSE31378
Host cell gene expression in Human respiratory syncytial virus (HRSV) infected mouse macrophage cells at 4, 24 hours post infection
  • organism-icon Mus musculus
  • sample-icon 9 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

We used the microarray data to analyze host cells response on mouse macrophage cells infected with HRSV

Publication Title

A systems-based approach to analyse the host response in murine lung macrophages challenged with respiratory syncytial virus.

Sample Metadata Fields

Specimen part, Time

View Samples
accession-icon GSE31472
Host cell gene expression in Influenza A/duck/Malaysia/F118/08/2004 (H5N2) infected A549 cells at 2, 4, 6, 8, and 10 hours post infection
  • organism-icon Homo sapiens
  • sample-icon 17 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

We used the microarray data to analyze host cells response on A549 cells infected with A/duck/Malaysia/F118/08/2004(H5N2)

Publication Title

Activation of type I and III interferon signalling pathways occurs in lung epithelial cells infected with low pathogenic avian influenza viruses.

Sample Metadata Fields

Specimen part, Cell line, Time

View Samples
accession-icon GSE31471
Host cell gene expression in Influenza A/Duck/Malaysia/01 (H9N2) infected A549 cells at 2, 4, 6, 8 and 10 hours post infection
  • organism-icon Homo sapiens
  • sample-icon 17 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

We used the microarray data to analyze host cells response on A549 cells infected with A/Duck/Malaysia/01 (H9N2)

Publication Title

Activation of type I and III interferon signalling pathways occurs in lung epithelial cells infected with low pathogenic avian influenza viruses.

Sample Metadata Fields

Specimen part, Cell line, Time

View Samples
accession-icon GSE31518
Host cell gene expression in Influenza A virus (A/Singapore/478/2009 (pH1N1)) infected A549 cells at 2, 4, 6, 8 and 10 hours post infection
  • organism-icon Homo sapiens
  • sample-icon 16 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

We used the microarray data to analyze host cells response on A549 cells infected with Influenza A virus (A/Singapore/478/2009 (pH1N1))

Publication Title

Activation of type I and III interferon signalling pathways occurs in lung epithelial cells infected with low pathogenic avian influenza viruses.

Sample Metadata Fields

Specimen part, Cell line, Time

View Samples
accession-icon GSE31506
Host cell gene expression in Influenza A/duck/Malaysia/F118/08/2004 (H5N2) infected CEF cells at 2, 4, 6, 8, and 10 hours post infection
  • organism-icon Gallus gallus
  • sample-icon 18 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2), Affymetrix Chicken Genome Array (chicken)

Description

We used the microarray data to analyze host cells response on CEF cells infected with A/duck/Malaysia/F118/08/2004(H5N2)

Publication Title

Activation of type I and III interferon signalling pathways occurs in lung epithelial cells infected with low pathogenic avian influenza viruses.

Sample Metadata Fields

Specimen part, Cell line, Time

View Samples
accession-icon GSE31505
Host cell gene expression in Influenza A/Duck/Malaysia/01 (H9N2) infected CEF cells at 2, 4, 6, 8 and 10 hours post infection
  • organism-icon Gallus gallus
  • sample-icon 18 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2), Affymetrix Chicken Genome Array (chicken)

Description

We used the microarray data to analyze host cells response on CEF cells infected with A/Duck/Malaysia/01 (H9N2)

Publication Title

Activation of type I and III interferon signalling pathways occurs in lung epithelial cells infected with low pathogenic avian influenza viruses.

Sample Metadata Fields

Specimen part, Cell line, Time

View Samples
accession-icon GSE31476
Host cell gene expression in Influenza A/WSN/33 (H1N1) infected CEF cells at 2, 4, 6, and 8 hours post infection
  • organism-icon Gallus gallus
  • sample-icon 15 Downloadable Samples
  • Technology Badge Icon Affymetrix Chicken Genome Array (chicken)

Description

We used the microarray data to analyze host cells response on CEF cells infected with A/WSN/33 (H1N1)

Publication Title

Activation of type I and III interferon signalling pathways occurs in lung epithelial cells infected with low pathogenic avian influenza viruses.

Sample Metadata Fields

Specimen part, Cell line, Time

View Samples
accession-icon GSE31469
Host cell gene expression in Influenza A/WSN/33 (H1N1) infected A549 cells at 2, 4 and 6 hours post infection
  • organism-icon Homo sapiens
  • sample-icon 12 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

We used the microarray data to analyze host cells response on A549 cells infected with A/WSN/33 (H1N1)

Publication Title

Activation of type I and III interferon signalling pathways occurs in lung epithelial cells infected with low pathogenic avian influenza viruses.

Sample Metadata Fields

Specimen part, Cell line, Time

View Samples
accession-icon GSE31524
Host cells infected by various types of viruses
  • organism-icon Gallus gallus, Mus musculus, Homo sapiens
  • sample-icon 8 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2), Affymetrix Mouse Genome 430 2.0 Array (mouse4302)

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Activation of type I and III interferon signalling pathways occurs in lung epithelial cells infected with low pathogenic avian influenza viruses.

Sample Metadata Fields

Specimen part, Cell line, Time

View Samples
accession-icon GSE31475
Host cell gene expression in Influenza A/duck/Malaysia/F119/3/1997 (H5N3) infected A549 cells at 10 hour post infection
  • organism-icon Homo sapiens
  • sample-icon 6 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

We used the microarray data to analyze host cells response on A549 cells infected with A/duck/Malaysia/F119/3/1997(H5N3)

Publication Title

Activation of type I and III interferon signalling pathways occurs in lung epithelial cells infected with low pathogenic avian influenza viruses.

Sample Metadata Fields

Specimen part, Cell line, Time

View Samples
...

refine.bio is a repository of uniformly processed and normalized, ready-to-use transcriptome data from publicly available sources. refine.bio is a project of the Childhood Cancer Data Lab (CCDL)

fund-icon Fund the CCDL

Developed by the Childhood Cancer Data Lab

Powered by Alex's Lemonade Stand Foundation

Cite refine.bio

Casey S. Greene, Dongbo Hu, Richard W. W. Jones, Stephanie Liu, David S. Mejia, Rob Patro, Stephen R. Piccolo, Ariel Rodriguez Romero, Hirak Sarkar, Candace L. Savonen, Jaclyn N. Taroni, William E. Vauclain, Deepashree Venkatesh Prasad, Kurt G. Wheeler. refine.bio: a resource of uniformly processed publicly available gene expression datasets.
URL: https://www.refine.bio

Note that the contributor list is in alphabetical order as we prepare a manuscript for submission.

BSD 3-Clause LicensePrivacyTerms of UseContact